Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802664.1_cds_XP_016480470.1_7152
CDS Infomation

[gene=LOC107801629] [db_xref=GeneID:107801629] [protein=coatomer subunit alpha-1] [partial=3'] [protein_id=XP_016480470.1] [location=complement(join(<4..1097,1635..1788,1988..2328,3191..3398))] [gbkey=CDS]
Sequence

ATGTTGACGAAGTTCGAAACGAAGAGTAATCGAGTCAAAGGACTCAGTTTTCATACCAAA
AGGCCATGGATCTTAGCTAGTCTTCATAGCGGTGTGATCCAGCTTTGGGATTACCGTATG
GGAACACTCATTGATCGATTTGATGAGCACGATGGCCCTGTTCGCGGCGTTCATTTTCAC
AAATCTCAGCCTCTCTTTGTATCCGGAGGAGATGACTACAAGATAAAAGTCTGGAATTAT
AAGCTGCATCGGTGCTTATTTACCCTTCTTGGACATCTTGATTATATCCGCACCGTTCAA
TTCCATCATGAATATCCCTGGATTGTCAGTGCAAGTGATGATCAGACAATCAGAATATGG
AACTGGCAGTCTCGCACTTGTATTTCTGTCTTGACTGGGCACAACCATTATGTGATGTGT
GCCTTATTTCATCCCAAAGAGGACTTGGTTGTTTCTGCATCATTGGATCAGACCGTTCGG
GTCTGGGATATTGGTGCCCTAAGGAAGAAAACTGTTTCTCCTGCTGATGACATCTTGCGC
TTGAGCCAGATGAACACAGACTTCTTTGGTGGAGTAGATGCTGTTGTGAAATATGTCTTG
GAGGGTCACGATCGAGGGGTTAACTGGGCTTCATTTCATCCTACGCTGCCCCTGATCGTC
TCTGGTGCAGATGATCGCCAGGTGAAAATCTGGCGGATGAATGATACAAAGGCTTGGGAG
GTGGATACATTGAGAGGCCATATGAACAATGTATCATGTGTTCAGTTCCATGCGAAGCAA
GATATTATTGTTTCAAATTCAGAGGATAAGAGCATTCGCGTGTGGGATGCTACAAAAAGG
ACTGGTCTTCAGACTTTCCGCAGGGAGCATGACAGATTCTGGATCCTTGCAGCTCATCCT
GAGATGAATCTTCTAGCAGCTGGTCATGACAGTGGGATGATAGTGTTCAAGTTGGAGAGA
GAACGCCCTGCTTTTTCTGTGAGCAGTGATTCCTTGTTTTATGTGAAGGATCGTTTTCTC
CGTGTGTACGAGTACTCAACTCAGAAGGAGAATCAGTTGATACCAATTAGAAGACCTGGT
TCAAACAGTCTGAACCAAGGTCCACGAACGCTCTCTTACAGTCCTACGGAAAATGCTGTT
TTGATCTGTTCAGATGTGGATGGGGGTTCCTACGAACTGTACATCATACCTAAAGACAGT
TATGGTAGGGGTGATACTGCTCAAGATGCAAAAAGGGGAACTGGAGGATCAGCAGTGTTT
GTTGCTCGTAACAGGTTTGCAGTGCTTGAGAAGAGCACCAACCAAGTCCTGGTCAAAAAT
CTGAAAAATGAGATTGTTAAGAAAAGCCTTCTTCCTACTGTTACTGATGCTATATTTTAT
GCCGGCACAGGAAACTTACTATGCAGGGCAGAGGACAGAGTTGTTATTTTCGATCTCCAG
CAGAGAATTGTTCTTGGAGAGCTTCAGACTCCTTTCATCAGATATGTTGTTTGGTCATCG
GACATGGAAAGTGTCGCTTTGCTTAGCAAGCATTCCATAGTAATAGCCGATAAGAAGCTT
GTGCACCGTTGCACTCTTCACGAGACAATTCGTGTCAAGAGTGGTGCCTGGGATGACAAT
GGGGTCTTCATCTATACAACTCTCACCCACATCAAGTATTGTCTTCCCAATGGAGACAGT
GGAATCATCAAAACCTTAGACGTCCCAGTCTACATTACTAAGATATATGGGAACACAATC
TTTTGCTTGGATCGAGATGGGAAAAACCGTCCTATCATTATTGATTCAACTGAATAC

Peptide Sequence

PEP ID

XP_016480470.1
PEP Infomation

PREDICTED: coatomer subunit alpha-1, partial [Nicotiana tabacum]
Sequence

MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCALFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVQFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSSDSLFYVKDRFLRVYEYSTQKENQLIPIRRPG
SNSLNQGPRTLSYSPTENAVLICSDVDGGSYELYIIPKDSYGRGDTAQDAKRGTGGSAVF
VARNRFAVLEKSTNQVLVKNLKNEIVKKSLLPTVTDAIFYAGTGNLLCRAEDRVVIFDLQ
QRIVLGELQTPFIRYVVWSSDMESVALLSKHSIVIADKKLVHRCTLHETIRVKSGAWDDN
GVFIYTTLTHIKYCLPNGDSGIIKTLDVPVYITKIYGNTIFCLDRDGKNRPIIIDSTEY

Transcript Sequence

Gene sequence data has not been registered.